CytokineProfile Home
R package and R Shiny Application for Comprehensive Cytokine Analysis
CytokineProfile is designed for advanced cytokine data analysis. It provides a comprehensive suite of functions for exploratory, univariate, and multivariate analysis as well as machine learning methods tailored to your cytokine datasets.
Why Cytokine Profiling?
Cytokine profiling serves as an invaluable tool in biomedical research and diagnostics, shedding light on immune responses and disease mechanisms through the analysis of cytokine interactions. Existing tools lack features specifically tailored to the complexities of cytokine data.
CytokineProfile fills this gap by providing a comprehensive pipeline—from data import and quality control to advanced machine-learning classification and publication-ready visualizations.
Key Features at a Glance
• Data Preprocessing & QC
Load CSV/Excel and detect outliers.
• Exploratory & Multivariate Analysis
Boxplots, PCA, and PLS-DA (with confidence ellipses &
backgrounds).
• Machine Learning
XGBoost and Random Forest.
• Advanced Visualizations
Dual-flashlight plots, effect-size–enriched error bars, volcano
plots.
• R Shiny Application
User-friendly Shiny Application for non-coders.